COMPSs-Mobile: parallel programming for mobile-cloud computing

The advent of Cloud and the popularization of mobile devices have led us to a shift in computing access. Computing users will have an interaction display while the real computation will be performed remotely, in the Cloud. COMPSs-Mobile is a framework that aims to ease the development of energy-efficient and high-performing applications for this environment. The framework provides an infrastructure-unaware programming model that allows developers to code regular Android applications that, transparently, are parallelized, and partially offloaded to remote resources. This paper gives an overview of the programming model and describes the internal components of the toolkit which supports it focusing on the offloading and checkpointing mechanisms. It also presents the results of some tests conducted to evaluate the behavior of the solution and to measure the potential benefits in Android applications.Peer ReviewedPostprint (published version

A hierarchic task-based programming model for distributed heterogeneous computing

Distributed computing platforms are evolving to heterogeneous ecosystems with Clusters, Grids and Clouds introducing in its computing nodes, processors with different core architectures, accelerators (i.e. GPUs, FPGAs), as well as different memories and storage devices in order to achieve better performance with lower energy consumption. As a consequence of this heterogeneity, programming applications for these distributed heterogeneous platforms becomes a complex task. Additionally to the complexity of developing an application for distributed platforms, developers must also deal now with the complexity of the different computing devices inside the node. In this article, we present a programming model that aims to facilitate the development and execution of applications in current and future distributed heterogeneous parallel architectures. This programming model is based on the hierarchical composition of the COMP Superscalar and Omp Superscalar programming models that allow developers to implement infrastructure-agnostic applications. The underlying runtime enables applications to adapt to the infrastructure without the need of maintaining different versions of the code. Our programming model proposal has been evaluated on real platforms, in terms of heterogeneous resource usage, performance and adaptation.This work has been supported by the European Commission through the Horizon 2020 Research and Innovation program under contract 687584 (TANGO project) by the Spanish Government under contract TIN2015-65316 and grant SEV-2015-0493 (Severo Ochoa Program) and by Generalitat de Catalunya under contracts 2014-SGR-1051 and 2014-SGR-1272.Peer ReviewedPostprint (author's final draft

Enabling GPU Support for the COMPSs-Mobile Framework

Using the GPUs embedded in mobile devices allows for increasing the performance of the applications running on them while reducing the energy consumption of their execution. This article presents a task-based solution for adaptative, collaborative heterogeneous computing on mobile cloud environments. To implement our proposal, we extend the COMPSs-Mobile framework – an implementation of the COMPSs programming model for building mobile applications that offload part of the computation to the Cloud – to support offloading computation to GPUs through OpenCL. To evaluate our solution, we subject the prototype to three benchmark applications representing different application patterns.This work is partially supported by the Joint-Laboratory on Extreme Scale Computing (JLESC), by the European Union through the Horizon 2020 research and innovation programme under contract 687584 (TANGO Project), by the Spanish Goverment (TIN2015-65316-P, BES-2013-067167, EEBB-2016-11272, SEV-2011-00067) and the Generalitat de Catalunya (2014-SGR-1051).Peer ReviewedPostprint (author's final draft

A mathematical formulation of the loop pipelining problem

This paper presents a mathematical model for the loop pipelining problem that considers several parameters for optimization and supports any combination of resource and timing constraints. The unrolling degree of the loop is one of the variables explored by the model. By using Farey’s series, an optimal exploration of the unrolling degree is performed and optimal solutions not considered by other methods are obtained. Finding an optimal schedule that minimizes resource and register requirements is solved by using an Integer linear programming (ILP) model. A novel paradigm called branch and prune is proposed to eficiently converge towards the optimal schedule and prune the search tree for integer solutions, thus drastically reducing the running time. This is the first formulation that combines the unrolling degree of the loop with timing and resource constraints in a mathematical model that guarantees optimal solutions.Peer ReviewedPostprint (author's final draft

Analysis of the overheads incurred due to speculation in a task based programming model

In order to efficiently utilize the ever increasing processing power of multi-cores, a programmer must extract as much parallelism as possible from a given application. However with every such attempt there is an associated overhead of its implementation. A parallelization technique is beneficial only if its respective overhead is less than the performance gains realized. In this paper we analyze the overhead of one such endeavor where, in SMPSs, speculation is used to execute tasks ahead in time. Speculation is used to overcome the synchronization pragmas in SMPSs which block the generation of work and lead to the underutilization of the available resources. TinySTM, a Software Transactional Memory library is used to maintain correctness in case of mis-speculation. In this paper, we analyze the affect of TinySTM on a set of SMPSs applications which employ speculation to improve the performance. We show that for the chosen set of benchmarks, no performance gains are achieved if the application spends more than 1% of its execution time in TinySTM.Peer ReviewedPostprint (published version

UNA MAESTRA INSTITUTENSE Y EMPRENDEDORA: ELENA CÁRDENAS

Con este trabajo se pretende colaborar con la reconstrucción histórica de una carrera eminentemente orientada al sexo femenino y que hasta el momento ha sido poco estudiada: la secretarial. El relato se localiza en la Ciudad de Toluca, en los años del porfiriato y se prolonga hasta el período posrevolucionario. La figura central es la Maestra Elena Cárdenas Guerrero, educadora que rompió paradigmas de su época al dedicarse a la formación de mujeres que laboraban en la industria y el comercio, en una sociedad todavía no acostumbrada a sus presencias en el ámbito laboral. También innovó la taquigrafía y montó una escuela primaria elemental siendo una educadora de vanguardia.Con este trabajo se pretende colaborar con la reconstrucción histórica de una carrera eminentemente orientada al sexo femenino y que hasta el momento ha sido poco estudiada: la secretarial. El relato se localiza en la Ciudad de Toluca, en los años del porfiriato y se prolonga hasta el período posrevolucionario. La figura central es la Maestra Elena Cárdenas Guerrero, educadora que rompió paradigmas de su época al dedicarse a la formación de mujeres que laboraban en la industria y el comercio, en una sociedad todavía no acostumbrada a sus presencias en el ámbito laboral. También innovó la taquigrafía y montó una escuela primaria elemental siendo una educadora de vanguardia

AutoParallel: A Python module for automatic parallelization and distributed execution of affine loop nests

The last improvements in programming languages, programming models, and frameworks have focused on abstracting the users from many programming issues. Among others, recent programming frameworks include simpler syntax, automatic memory management and garbage collection, which simplifies code re-usage through library packages, and easily configurable tools for deployment. For instance, Python has risen to the top of the list of the programming languages due to the simplicity of its syntax, while still achieving a good performance even being an interpreted language. Moreover, the community has helped to develop a large number of libraries and modules, tuning them to obtain great performance. However, there is still room for improvement when preventing users from dealing directly with distributed and parallel computing issues. This paper proposes and evaluates AutoParallel, a Python module to automatically find an appropriate task-based parallelization of affine loop nests to execute them in parallel in a distributed computing infrastructure. This parallelization can also include the building of data blocks to increase task granularity in order to achieve a good execution performance. Moreover, AutoParallel is based on sequential programming and only contains a small annotation in the form of a Python decorator so that anyone with little programming skills can scale up an application to hundreds of cores.Comment: Accepted to the 8th Workshop on Python for High-Performance and Scientific Computing (PyHPC 2018

Transparent Orchestration of Task-based Parallel Applications in Containers Platforms

This paper presents a framework to easily build and execute parallel applications in container-based distributed computing platforms in a user-transparent way. The proposed framework is a combination of the COMP Superscalar (COMPSs) programming model and runtime, which provides a straightforward way to develop task-based parallel applications from sequential codes, and containers management platforms that ease the deployment of applications in computing environments (as Docker, Mesos or Singularity). This framework provides scientists and developers with an easy way to implement parallel distributed applications and deploy them in a one-click fashion. We have built a prototype which integrates COMPSs with different containers engines in different scenarios: i) a Docker cluster, ii) a Mesos cluster, and iii) Singularity in an HPC cluster. We have evaluated the overhead in the building phase, deployment and execution of two benchmark applications compared to a Cloud testbed based on KVM and OpenStack and to the usage of bare metal nodes. We have observed an important gain in comparison to cloud environments during the building and deployment phases. This enables better adaptation of resources with respect to the computational load. In contrast, we detected an extra overhead during the execution, which is mainly due to the multi-host Docker networking.This work is partly supported by the Spanish Government through Programa Severo Ochoa (SEV-2015-0493), by the Spanish Ministry of Science and Technology through TIN2015-65316 project, by the Generalitat de Catalunya under contracts 2014-SGR-1051 and 2014-SGR-1272, and by the European Union through the Horizon 2020 research and innovation program under grant 690116 (EUBra-BIGSEA Project). Results presented in this paper were obtained using the Chameleon testbed supported by the National Science Foundation.Peer ReviewedPostprint (author's final draft

Towards Automatic Application Migration to Clouds

Porting applications to Clouds is one of the key challenges in software industry. The available approaches to perform this task are basically either services derived from alliances of major software vendors and Cloud providers focusing on their own products, or small platform providers focusing on the most popular software stacks. For migrating other types of software, the options are limited to infrastructure-as-a-Service (IaaS) solutions which require a lot of programming effort for adapting the software to a Cloud provider’s API. Moreover, if it must be deployed in different providers, new integration procedures must be designed and implemented which could be a nightmare. This paper presents a solution for facilitating the migration of any application to the cloud, inferring the most suitable deployment model for the application and automatically deploying it in the available Cloud providers

Heterogeneous hierarchical workflow composition

Workflow systems promise scientists an automated end-to-end path from hypothesis to discovery. However, expecting any single workflow system to deliver such a wide range of capabilities is impractical. A more practical solution is to compose the end-to-end workflow from more than one system. With this goal in mind, the integration of task-based and in situ workflows is explored, where the result is a hierarchical heterogeneous workflow composed of subworkflows, with different levels of the hierarchy using different programming, execution, and data models. Materials science use cases demonstrate the advantages of such heterogeneous hierarchical workflow composition.This work is a collaboration between Argonne National Laboratory and the Barcelona Supercomputing Center within the Joint Laboratory for Extreme-Scale Computing. This research is supported by the U.S. Department of Energy, Office of Science, Office of Advanced Scientific Computing Research, under contract number DE-AC02- 06CH11357, program manager Laura Biven, and by the Spanish Government (SEV2015-0493), by the Spanish Ministry of Science and Innovation (contract TIN2015-65316-P), by Generalitat de Catalunya (contract 2014-SGR-1051).Peer ReviewedPostprint (author's final draft